Microbial Ecology Journal Club

Coordinated by Dr. Klaus Nüsslein.

FALL 2001

Friday September 21

"Recovery of hydrogen peroxide sensitive culturable cells of Vibrio vulnificus gives the appearance of resuscitation from a Viable But Non Culturable State". Bogosian et al. J. Bac Vol 182(18):5070-5075.
Introduction will be held by Chris

Monday October 1

"Hydrogen concentrations as an indicator of the predominant terminal electron-accepting reactions in aquatic sediments". Lovley, D. and Goodwin, S. 1988. Geochimica and Cosmochimica Acta 52:2993-3003.
Introduction will be held by Brian

Monday, October 8

"The Directed Mutation Controversy and Neo-Darwinism". Richard Lenski and John Mittler (1993). Science 259: 188-194.
Introduction will be held by Cristine.

Monday, October 15

"Ecological strategy of bacteria: Specific nature of the problem". Golovlev, E.L. MICROBIOLOGY 70 (4): 379-383 JUL-AUG 2001
Introduction will be held by Lisa.

Monday, October 22

"Linking genetic identity and function in communities of uncultured bacteria". Gray ND, Head IM. Environ Microbiol 2001 Aug;3(8):481-492
The introduction is held by Steve.

Monday, October 29

"Results of Multiple Diagnostic Tests for Mycobacterium avium subsp. paratuberculosis in Patients with Inflammatory Bowel Disease and in Controls" M. T. Collins, G. Lisby, C. Moser, D. Chicks, S. Christensen J Clin Microbiol. 2000 Dec; 38(12):4373-81.
Introduction is held by Peter.

Monday, November 5

Paper 1: Wuertz, S., L. Hendrickx, et al. (2001). "In situ quantification of gene transfer in biofilms." Methods Enzymol 336: 129-143.
Paper 2: Cowan, S., E. Gilbert, A. Khlebnikov, and J. D. Keasling. "Dual Labeling with Green Fluorescent Proteins for Confocal Microscopy". Applied and Environmental Microbiology, January 2000, 66(1): 413-418.
The introduction is held by Jesse

Monday, November 19

"Thermophilic bacterial communities in hot composts as revealed by most probable number counts and molecular (16S rDNA) methods" Blanc, Marilley, Beffa and Aragno. 1999. FEMS Microbiol Ecol 28:141-149
The introduction is held by Beth

Monday, November 26

"Response of a Pseudomonas aeruginosa biofilm community to DNA - damaging chemical agents". Elasri, Redi, Hutchens, and Miller. 2000. FEMS Microbiol Ecol 33:21-25
Introduction will be held by Nan

Monday, December 3

"Bias caused by template annealing in the amplification of mixtures of 16S rRNA genes by PCR" M.T. Suzuki and S.J. Giovannoni Appl. Envir. Microbiol. 1996 62(2): 625-630
Introduction will be held by Javier.

Monday, December 10

"Analysis of Bacterial Communities in the Rhizosphere of Chrysanthemum via Denaturing Gradient Gel Electrophoresis of PCR-Amplified 16S rRNA as well as DNA Fragments Coding for 16S rRNA" Bernadette M. Duineveld, George A. Kowalchuk, Anneke Keijzer, Jan Dirk van Elsas, and Johannes A. van Veen Applied and Environmental Microbiology, January 2001, 67(1): 172-178.
Introduction will be held by Dawn.

Monday, December 17

"Development and Evaluation of Functional Gene Arrays for Detection of Selected Genes in the Environment" L. Wu, D.K. Thompson, G. Li, Richard A. Hurt, J. M. Tiedje and J. Zhou Appl. Envir. Microbiol. 2001 67(12): 5780-5790
Introduction will be held by Vicente.


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